Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015833779.1_cds_XP_016505402.1_18746
CDS Infomation

[gene=LOC107823288] [db_xref=GeneID:107823288] [protein=protein IQ-DOMAIN 1-like] [protein_id=XP_016505402.1] [location=complement(join(58334..59125,59223..59360,59614..59859,60353..60607,60692..60820))] [gbkey=CDS]
Sequence

ATGGCAAAGAAGAAGGGAGGTAGTTCATGGTTGAGTGCTGTTAAAAGGGCTTTCAGGTCA
CCAACTAAAGATAACAGCTGCGACAAAAAGGCTAAAAGAGAACATGAGCTAGAGGAAGAT
GAAGAAAAGAAAAGAGAGAAGAGAAGGTGGCTGTTCAGAAAACAATCACAAAATGCTCAA
CAAAATGAAGGGAAGGTAATTGCTGATCCAAAGCATGCAATTGCAGTGGCCGCAGCAACA
GCAGCAGCAGCTGAAGCTGCCGTGGCCACAGCTCAAGCAGCTGTTGAGATCATTCGGTTG
ACACGATCCTCAAATAATCCACCTTCTTCAAACAGGCAACACAATGCTGCTATACTCATC
CAAACTGCATTCAGAGGATATCTGGCTAGGAGGGCACTAATTGCATTGAAGGGGATAGTG
AAGCTTCAAGCATTAATAAGGGGTCAAAACGTCAGGAAGCAAGCAAAGATGACACTCAAA
TGTATGCAAGCTCTCCTTAGGGTGCAGGCTCGGGTTCGCGAACAACGTGCTCGCCTTTCA
CATGATGGAGGCCGCAGGTCTATGTTTGCTGAAACCACTAATTTATGGGACTCTAAATAT
CTTCATGACATCCGAGACAGGAAGTCCAGATCTAGAGATGGAAGCTCCATAGCTGATGAT
TGGAGGGATTGCCCGAGATCGCTTCTAGAGCTGGAATCAATGTTACAAGCCAGAAAAGAA
GCTTCCTTTAAACAGGAAAAATCCCTTGCTCATGCTTTTACTCAGCAGGTATGGGATGAG
ATGGATCTTGGCAGTGAAGAAAGAAATGAGAGAGAACTAGAAGAGACAGCAAATTGGCTA
GATGATTGGATGTCGTCAAAGCAATGGAACACGGTCAGCAGCAGAGGTTCATTTGACAGA
AGGGACTCTATAAAGACTGTTGAGATGGACACGGCTAAGTCCTATTCTAACATGGTTCCA
AATGCTCGAAGATCACAACACTCGAGTCCACTTCACAGACAAGCTAGTAGTCCTCATTGT
GCTGCTAATTCTCCCCATCACCAGAGACCATCACATTACAATTACTCCACAATTCAACCA
CCAGCTACCCCACCCCCTTGTCAACCAAAACCTCTCCAAATGCGCCCAACAAGCCCACGT
AAAAGCCAATCAACTGCAAACACTCCATGCCTACGCTCCACTACCCGTTCAAACAGTATA
ATGTCTCGTTATAGCACTTCAGGAAATGATGCAGCTACTGCAGTTCCTAATTATATGGCT
GCTACCGAGTCTGCAAAAGCTCGGATTCGTTCACAAAGCACGCCAAAACAAAGGCCGTCT
ACGCCAGAAAGAGAAAGAGTTGGGTCCGTCAAAAAACGTCTGTCTTACCCAATTCCTGAG
CCATATTCTCTTAATGCTACCTATGGCTATAGTCAGAACTTGAGAAGTCCTAGCTTCAAA
AGTCTCCAAGCTGCCTATCTGGGAATGGAACAACAATCAAACTACTCGTGTTACACAGAC
AGCCTTGGTGGAGAAATTTCGCCTTGTTCAACCACTGATTTGAGAAGGTGGTTAAGATGA

Peptide Sequence

PEP ID

XP_016505402.1
PEP Infomation

PREDICTED: protein IQ-DOMAIN 1-like [Nicotiana tabacum]
Sequence

MAKKKGGSSWLSAVKRAFRSPTKDNSCDKKAKREHELEEDEEKKREKRRWLFRKQSQNAQ
QNEGKVIADPKHAIAVAAATAAAAEAAVATAQAAVEIIRLTRSSNNPPSSNRQHNAAILI
QTAFRGYLARRALIALKGIVKLQALIRGQNVRKQAKMTLKCMQALLRVQARVREQRARLS
HDGGRRSMFAETTNLWDSKYLHDIRDRKSRSRDGSSIADDWRDCPRSLLELESMLQARKE
ASFKQEKSLAHAFTQQVWDEMDLGSEERNERELEETANWLDDWMSSKQWNTVSSRGSFDR
RDSIKTVEMDTAKSYSNMVPNARRSQHSSPLHRQASSPHCAANSPHHQRPSHYNYSTIQP
PATPPPCQPKPLQMRPTSPRKSQSTANTPCLRSTTRSNSIMSRYSTSGNDAATAVPNYMA
ATESAKARIRSQSTPKQRPSTPERERVGSVKKRLSYPIPEPYSLNATYGYSQNLRSPSFK
SLQAAYLGMEQQSNYSCYTDSLGGEISPCSTTDLRRWLR

Transcript Sequence

Gene sequence data has not been registered.